I agree with the removing the BB suggestion.
Also, roll the frame around so the Framesaver gets on more surfaces on the interior. Ideally let it sit for a couple days to really set up before rebuilding your bike. I had my shop apply a good amount of Framesaver when my bike was built a couple winters ago and now I just give it a squirt in the really exposed spots before the salt season starts in earnest.
The stuff is crazy sticky/tacky and looks like earwax. Apply it in an area where you don't care about the floor or have put down a LOT of newspaper. Wipe the exterior of your frame thoroughly when you're done.