Of the things you mentioned the only one I have in my rack trunk is the 3 quarters - sometimes. Depends on if I have change in my wallet's little change pocket. My rack trunk is for wallet, keys, unused lights, extra batteries, cell phone, lunch, change of clothes, toiletires and whatever else I might need to carry to/from work or on a ride.

tube
2 levers
patch kit
multi tool
needle nose locking pliers
2 zip ties
^
These are all in my seat bag.


pressure gauge
^
Don't have one except for on my good floor pump at home. I use wide enough tires that I can just eyeball this in a pinch if changing a tube on the road.


mini hand pump
^
Mounted on my frame.


swiss army knife
tube of acetaminophen; ibuprofen and aspirin
^
Will probably be in my panniers when I tour, but not on my commute.