Our LBS will match the spring prices offered at the spring expo--in my case, a big Milwaukee shop that puts on the expo has somewhat lower prices than my LBS. It's probably too late for that but if you're in no hurry...
There won't be a ton of markup on a $1k bike. It's not like haggling for that new Chev Silverado. You'll likely get the bottle & cage, and/or 10% all accessories with the bike purchase. Time to get the pump, tubes, levers, rack, bag(s), etc.