After troubleshooting from suggestions given, it's clear that my shoes are too tight, and that the cleat position was too far forward.
I recently had a fitting, and the placement of my cleats seemed off then. Everything else is dailed in. HOwever, I did make adjustments to see if the seat was it.
Another I'm doing for recovering from metatarsalgia is accupunture. I live in China. This stuff works!