Probably the best idea. My guess is that padded shorts are "better" is that the pad moves with your body so over several hours in the saddle, it's less likely to cause repetitive trauma/injury that leads to soreness.

Since contact points on the body are very personal, your individual response may vary.

That said, I do notice that most "serious" cyclists use padded shorts and a firm saddle, and most newbies use a padded saddle and no padding in their shorts.

The shorter your rides, the less it probably matters but go ahead and try for yourself.