To touch up the scuffs on my Fuji's 40+ yr old Fujita Belt saddle, I use Kiwi leather dye. Fortunately, black is black... However, a trip to a cobbler (or if Tandy Leather is still around) may yield dyes in many other colors.
For water resistance, I try to treat the saddle -- including the undersides - with Pecard Silicone leather preservative. I also used this stuff on my leather shoes and boots when I was a mail carrier for 33 years. Applied once or twice a year and it kept my feet dry when walking through rain or snow and the leather never broke down. The 4 fl oz can has lasted me for well over 20 years!
__________________
'75 Fuji S-10S bought new, 52k+ miles and still going!
'84 Univega Gran Tourismo
'84 Univega Viva Sport
'86 Miyata 710
'90 Schwinn Woodlands
Unknown brand MTB of questionable lineage aka 'Mutt Trail Bike'
Plus or minus a few others from time-to-time