A quick update: I've been recovering from a small medical procedure and haven't felt like doing anything. So today I was finally able to get in the shop and work on aligning everything. All in all, I was successful. A little filing here, and little tweaking there and got it all lined up. Damn near perfect. Finished the seat stays as well and now just need to have them welded in. I should be able to get it all done in about a week or so with work and all.
Thanks for all the tips and advice. I really appreciate it.
Brandon