k, I think you are getting too scared right away. Ruining your enjoyment of the ride.

It's very likely that your front wheel will be OK but you'll have to replace the rear wheel. I still have the stock front wheel because I'm too cheap to have them make me a matched set.

I'm going to echo the recommendation. They need to tension-and-true the rear wheel. Part of what did my stock rear rim in was that they didn't tension it properly, they just re-trued it. Which then meant that four spokes gave lose and the rim was bent out of shape. Hence, new wheel.