Absolutely, go with what feels good, just make sure that what you intend to do with the bike lines up with HOW it feels good.
Let me say that another way <grin>. Just be sure that if (say) you intend to take long, rambling, 40-50 mile rides, that you get THAT kind of "feels good". Race geometry might get uncomfortable after a couple hours in the saddle. And vice versa, of course. Don't buy a relaxed-geo bike if your intent is to hammer hard on short rides.
thats my take from the cheap seats anyway.